| P | Rider | Team | Km/h | Lap time | Gap 1st/Prev. | |||
|---|---|---|---|---|---|---|---|---|
| 1 | Marc Marquez | Repsol Honda | 302.8 | 01:45.304 | ||||
| 2 | Aleix Espargaro | Suzuki Ecstar | 302.5 | 01:45.323 | 0.019 / 0.019 | |||
| 3 | Jorge Lorenzo | Movistar Yamaha | 302.4 | 01:45.337 | 0.033 / 0.014 | |||
| 4 | Andrea Dovizioso | Ducati | 307.6 | 01:45.339 | 0.035 / 0.002 | |||
| 5 | Valentino Rossi | Movistar Yamaha | 304.3 | 01:45.490 | 0.186 / 0.151 | |||
| 6 | Maverick Viñales | Suzuki Ecstar | 303.7 | 01:45.684 | 0.380 / 0.194 | |||
| 7 | Cal Crutchlow | LCR Honda | 303.2 | 01:45.733 | 0.429 / 0.049 | |||
| 8 | Hector Barbera* | Ducati | 308.2 | 01:45.773 | 0.469 / 0.040 | |||
| 9 | Alvaro Bautista | Aprilia Gresini | 301.0 | 01:46.143 | 0.839 / 0.370 | |||
| 10 | Pol Espargaro | Tech 3 | 306.2 | 01:46.403 | 1.099 / 0.260 | |||
| 11 | Danilo Petrucci | Octo Pramac Yakhnich | 301.6 | 01:46.437 | 1.133 / 0.034 | |||
| 12 | Scott Redding | Octo Pramac Yakhnich | 305.1 | 01:46.676 | 1.372 / 0.239 | |||
| 13 | Stefan Bradl | Aprilia Gresini | 301.0 | 01:46.714 | 1.410 / 0.038 | |||
| 14 | Jack Miller | EG 0,0 Marc VDS | 301.8 | 01:46.886 | 1.582 / 0.172 | |||
| 15 | Katsuyuki Nakasuga^ | Yamalube Racing | 301.8 | 01:46.987 | 1.683 / 0.101 | |||
| 16 | Yonny Hernandez | Pull & Bear Aspar | 303.9 | 01:47.235 | 1.931 / 0.248 | |||
| 17 | Bradley Smith | Tech 3 | 300.9 | 01:47.378 | 2.074 / 0.143 | |||
| 18 | Tito Rabat | EG 0,0 Marc VDS | 301.0 | 01:47.478 | 2.174 / 0.100 | |||
| 19 | Loris Baz | Avintia Racing | 294.7 | 01:48.247 | 2.943 / 0.769 | |||
| 20 | Hiroshi Aoyama~ | Repsol Honda | 302.7 | 01:48.637 | 3.333 / 0.390 | |||
| 21 | Eugene Laverty | Pull & Bear Aspar | 301.3 | 01:48.682 | 3.378 / 0.045 | |||
| 22 | Mike Jones° | Avintia Racing | 303.5 | 01:48.683 | 3.379 / 0.001 |
*Replaced injured Andrea Iannone at Ducati for the Japanese Grand Prix
^Wild card entry
~Replaced injured Dani Pedrosa from FP3 onwards
°Replaced Hector Barbera at Avintia Racing for the Japanese Grand Prix
Note: Repsol Honda rider Dani Pedrosa withdrew from the Japanese Grand Prix after fracturing his collarbone in Friday's FP2